Gene Overview  


General information


Gene id
AT4G27240
Species
Arabidopsis thaliana
Transcript
AT4G27240.1
Coordinates
13640160 - 13641640
Strand
positive
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000565   177 genes in 20 species
Sub family
ORTHO045735   2 genes in 2 species
Duplication type
Block duplicate
Description
zinc finger (C2H2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein-related (TAIR:AT5G54630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;zinc finger (C2H2 type) family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter41252280.000861403
InterPro domain(s)
Interpro idDescription
IPR007087 Zinc finger, C2H2-type
IPR015880 Zinc finger, C2H2-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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