Gene Overview  


General information


Gene id
AT4G23800
Species
Arabidopsis thaliana
Transcript
AT4G23800.1
Coordinates
12390228 - 12392516
Strand
positive
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM005070   28 genes in 19 species
Sub family
ORTHO007373   23 genes in 20 species
Duplication type
Block duplicate
Description
HMG (high mobility group) box protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: HMG (high mobility group) box protein (TAIR:AT4G11080.1); Has 73209 Blast hits to 39847 proteins in 2254 species: Archae - 389; Bacteria - 7210; Metazoa - 37524; Fungi - 4636; Plants - 3006; Viruses - 229; Other Eukaryotes - 20215 (source: NCBI BLink).;HMG (high mobility group) box protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR000910 High mobility group, HMG1/HMG2
IPR009071 High mobility group, superfamily
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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