Gene Overview  


General information


Gene id
AT4G21980
Species
Arabidopsis thaliana
Transcript
AT4G21980.2
Coordinates
11655868 - 11656809
Strand
positive
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000634   163 genes in 25 species
Sub family
ORTHO000739   48 genes in 22 species
Duplication type
Block duplicate
Description
Encodes APG8, a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition. Highest expression in flowers. mRNA abundance increased during dark-induced carbon starvation. Predominantly cytoplasmic with or without N starvation. Upon concanamycin A the protein accumulates in the central vacuole as punctuate structures that resemble autophagic bodies. This localization is more abundant upon N starvation.;Ubiquitin-like superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR004241 Light chain 3 (LC3)
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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