Gene Overview  


General information


Gene id
AT4G18360
Species
Arabidopsis thaliana
Transcript
AT4G18360.1
Coordinates
10146141 - 10148386
Strand
negative
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000741   146 genes in 25 species
Sub family
ORTHO000657   50 genes in 23 species
Duplication type
Block duplicate
Description
Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14420.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Aldolase-type TIM barrel family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR000262 FMN-dependent dehydrogenase
IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site
IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent
IPR013785 Aldolase-type TIM barrel
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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