Gene Overview  


General information


Gene id
AT4G17530
Species
Arabidopsis thaliana
Transcript
AT4G17530.1
Coordinates
9773721 - 9775424
Strand
negative
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000032   1498 genes in 25 species
Sub family
ORTHO000627   51 genes in 25 species
Duplication type
Block duplicate
Description
RAB GTPase homolog 1C (RAB1C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 29496 Blast hits to 29428 proteins in 784 species: Archae - 23; Bacteria - 169; Metazoa - 15486; Fungi - 4134; Plants - 3462; Viruses - 20; Other Eukaryotes - 6202 (source: NCBI BLink).;RAB GTPase homolog 1C
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

Loading...please wait

Toolbox


Functional annotation information


GO term(s)
Loading....please wait
Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0023060signal transmissionC_Hunter3312470.00000225295
InterPro domain(s)
Interpro idDescription
IPR005225 Small GTP-binding protein
IPR003579 Ras small GTPase, Rab type
IPR013753 Ras
IPR020851 Small GTPase
IPR001806 Ras GTPase
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found