Gene Overview 
General information
- Gene id
- AT4G17180
- Species
- Arabidopsis thaliana
- Transcript
- AT4G17180.1
- Coordinates
- 9646541 - 9648045
- Strand
- positive
- Chromosome
- 4
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000021 1755 genes in 25 species
- Sub family
- ORTHO004091 28 genes in 18 species
- Description
- O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G31140.1); Has 2802 Blast hits to 2733 proteins in 160 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 65; Plants - 2718; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).;O-Glycosyl hydrolases family 17 protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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Functional annotation information
- GO term(s)
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR012946 X8 IPR000490 Glycoside hydrolase, family 17 IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR017853 Glycoside hydrolase, catalytic core