Gene Overview  


General information


Gene id
AT4G17160
Species
Arabidopsis thaliana
Transcript
AT4G17160.1
Coordinates
9641980 - 9643541
Strand
negative
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000032   1498 genes in 25 species
Sub family
ORTHO045946   2 genes in 2 species
Duplication type
Tandem duplicate   and   Block duplicate
Description
RAB GTPase homolog B1A (RABB1a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog B1C (TAIR:AT4G17170.1); Has 26911 Blast hits to 26856 proteins in 734 species: Archae - 13; Bacteria - 137; Metazoa - 14009; Fungi - 4103; Plants - 2888; Viruses - 20; Other Eukaryotes - 5741 (source: NCBI BLink).;RAB GTPase homolog B1A
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0023060signal transmissionC_Hunter3312470.00000225295
InterPro domain(s)
Interpro idDescription
IPR005225 Small GTP-binding protein
IPR003579 Ras small GTPase, Rab type
IPR013753 Ras
IPR020851 Small GTPase
IPR001806 Ras GTPase
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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