Gene Overview 
General information
- Gene id
- AT4G17090
- Species
- Arabidopsis thaliana
- Transcript
- AT4G17090.1
- Coordinates
- 9605266 - 9607250
- Strand
- negative
- Chromosome
- 4
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000363 248 genes in 25 species
- Sub family
- ORTHO004634 27 genes in 19 species
- Description
- Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).;chloroplast beta-amylase
- Comment
- transcripteqProtein information
- Gene structure
-
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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Interpro id Description IPR001554 Glycoside hydrolase, family 14 IPR018238 Glycoside hydrolase, family 14, conserved site IPR001371 Glycoside hydrolase, family 14B, plant IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR017853 Glycoside hydrolase, catalytic core