Gene Overview  


General information


Gene id
AT4G16890
Species
Arabidopsis thaliana
Transcript
AT4G16890.1
Coordinates
9500506 - 9505455
Strand
negative
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000008   2766 genes in 21 species
Sub family
ORTHO021245   5 genes in 2 species
Duplication type
Tandem duplicate
Description
Encodes a Toll Interleukin1 receptor-nucleotide binding-Leu- rich repeat-type resistance gene (TIR-NB-LRR-type) involved in the salicylic acid-dependent defense response pathway. Mutant plants constitutively express pathogenesis-related (PR) genes and are pathogen resistant. Resistance signaling in snc1 requires EDS1, MOS3 and PAD4.;disease resistance protein (TIR-NBS-LRR class), putative
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0004888transmembrane receptor activityC_Hunter19160.00000000000347375
GO:0023060signal transmissionC_Hunter3312470.00000225295
InterPro domain(s)
Interpro idDescription
IPR001611 Leucine-rich repeat
IPR000767 Disease resistance protein
IPR000157 Toll-Interleukin receptor
IPR003593 ATPase, AAA+ type, core
IPR002182 NB-ARC
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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