Gene Overview  


General information


Gene id
AT4G15215
Species
Arabidopsis thaliana
Transcript
AT4G15215.1
Coordinates
8672070 - 8678874
Strand
positive
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000033   1489 genes in 25 species
Sub family
ORTHO000005   355 genes in 22 species
Duplication type
Tandem duplicate
Description
pleiotropic drug resistance 13 (PDR13); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 2 (TAIR:AT4G15230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;pleiotropic drug resistance 13
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0009926auxin polar transportC_Hunter1440.000000171271
GO:0003824catalytic activityC_Hunter130420.00000039317
GO:0003824catalytic activityC_Hunter334490.0000000627333
InterPro domain(s)
Interpro idDescription
IPR013525 ABC-2 type transporter
IPR013581 Plant PDR ABC transporter associated
IPR003439 ABC transporter-like
IPR003593 ATPase, AAA+ type, core
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found