Gene Overview 
General information
- Gene id
- AT4G12550
- Species
- Arabidopsis thaliana
- Transcript
- AT4G12550.1
- Coordinates
- 7439176 - 7439511
- Strand
- positive
- Chromosome
- 4
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000205 363 genes in 18 species
- Sub family
- ORTHO046776 2 genes in 1 species
- Duplication type
- Tandem duplicate and Block duplicate
- Description
- isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus.;Auxin-Induced in Root cultures 1
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0006869 lipid transport C_Hunter 1 9 10 2.81429e-16 GO:0006869 lipid transport C_Hunter 3 10 26 0.000000000000620068 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR003612 Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor IPR016140 Bifunctional inhibitor/plant lipid transfer protein/seed storage IPR013770 Plant lipid transfer protein/hydrophobic protein, helical domain