Gene Overview  


General information


Gene id
AT4G12545
Species
Arabidopsis thaliana
Transcript
AT4G12545.1
Coordinates
7434260 - 7434586
Strand
positive
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000205   363 genes in 18 species
Sub family
ORTHO046776   2 genes in 1 species
Duplication type
Tandem duplicate   and   Block duplicate
Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Auxin-Induced in Root cultures 1 (TAIR:AT4G12550.1); Has 752 Blast hits to 746 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 752; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0006869lipid transportC_Hunter19102.81429e-16
GO:0006869lipid transportC_Hunter310260.000000000000620068
InterPro domain(s)
Interpro idDescription
IPR003612 Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor
IPR016140 Bifunctional inhibitor/plant lipid transfer protein/seed storage
IPR013770 Plant lipid transfer protein/hydrophobic protein, helical domain
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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