Gene Overview 
General information
- Gene id
- AT4G01900
- Species
- Arabidopsis thaliana
- Transcript
- AT4G01900.1
- Coordinates
- 821736 - 823294
- Strand
- positive
- Chromosome
- 4
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM005333 27 genes in 21 species
- Sub family
- ORTHO005947 25 genes in 21 species
- Description
- encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity.;GLNB1 homolog
- Comment
- transcripteqProtein information
- Gene structure
-
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0009743 response to carbohydrate stimulus C_Hunter 3 11 72 0.0000590993 - InterPro domain(s)
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Interpro id Description IPR002187 Nitrogen regulatory protein PII IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal IPR011322 Nitrogen regulatory PII-like, alpha/beta IPR017918 Nitrogen regulatory protein PII, conserved site