Gene Overview 
General information
- Gene id
- AT3G54560
- Species
- Arabidopsis thaliana
- Transcript
- AT3G54560.1
- Coordinates
- 20196532 - 20197466
- Strand
- positive
- Chromosome
- 3
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000175 418 genes in 25 species
- Sub family
- ORTHO010769 18 genes in 11 species
- Duplication type
- Block duplicate
- Description
- Encodes HTA11, a histone H2A protein.;histone H2A 11
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0044464 cell part C_Hunter 4 142 263 0.000604253 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR007125 Histone core IPR002119 Histone H2A IPR009072 Histone-fold