Gene Overview  


General information


Gene id
AT3G48830
Species
Arabidopsis thaliana
Transcript
AT3G48830.1
Coordinates
18103272 - 18110216
Strand
positive
Chromosome
3
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM001958   63 genes in 22 species
Sub family
ORTHO005150   26 genes in 21 species
Duplication type
Block duplicate
Description
polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: polynucleotide adenylyltransferase activity, RNA binding, nucleotide binding, nucleic acid binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Poly A polymerase, head domain (InterPro:IPR002646), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT5G23690.1); Has 11594 Blast hits to 10901 proteins in 2648 species: Archae - 2; Bacteria - 6462; Metazoa - 1299; Fungi - 748; Plants - 674; Viruses - 8; Other Eukaryotes - 2401 (source: NCBI BLink).;polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR012677 Nucleotide-binding, alpha-beta plait
IPR002646 Poly A polymerase, head domain
IPR000504 RNA recognition motif, RNP-1
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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