Gene Overview 
General information
- Gene id
- AT3G45720
- Species
- Arabidopsis thaliana
- Transcript
- AT3G45720.1
- Coordinates
- 16785046 - 16786945
- Strand
- positive
- Chromosome
- 3
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000031 1620 genes in 22 species
- Sub family
- ORTHO001584 37 genes in 16 species
- Duplication type
- Tandem duplicate
- Description
- Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45680.1); Has 4336 Blast hits to 4242 proteins in 649 species: Archae - 2; Bacteria - 1337; Metazoa - 453; Fungi - 208; Plants - 2079; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).;Major facilitator superfamily protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0010447 response to acidity C_Hunter 1 7 9 1.00874e-21 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR016196 Major facilitator superfamily, general substrate transporter IPR000109 Oligopeptide transporter