Gene Overview  


General information


Gene id
AT3G45700
Species
Arabidopsis thaliana
Transcript
AT3G45700.1
Coordinates
16778765 - 16781068
Strand
positive
Chromosome
3
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000031   1620 genes in 22 species
Sub family
ORTHO001584   37 genes in 16 species
Duplication type
Tandem duplicate
Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45710.1); Has 3331 Blast hits to 3241 proteins in 427 species: Archae - 0; Bacteria - 506; Metazoa - 449; Fungi - 129; Plants - 2109; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).;Major facilitator superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0010447response to acidityC_Hunter1791.00874e-21
InterPro domain(s)
Interpro idDescription
IPR018456 PTR2 family proton/oligopeptide symporter, conserved site
IPR016196 Major facilitator superfamily, general substrate transporter
IPR000109 Oligopeptide transporter
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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