Gene Overview  


General information


Gene id
AT3G45680
Species
Arabidopsis thaliana
Transcript
AT3G45680.1
Coordinates
16770995 - 16772908
Strand
positive
Chromosome
3
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000031   1620 genes in 22 species
Sub family
ORTHO001584   37 genes in 16 species
Duplication type
Tandem duplicate
Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G45710.1); Has 3869 Blast hits to 3768 proteins in 536 species: Archae - 0; Bacteria - 851; Metazoa - 459; Fungi - 223; Plants - 2137; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).;Major facilitator superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

Loading...please wait

Toolbox


Functional annotation information


GO term(s)
Loading....please wait
Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0010447response to acidityC_Hunter1791.00874e-21
InterPro domain(s)
Interpro idDescription
IPR018456 PTR2 family proton/oligopeptide symporter, conserved site
IPR016196 Major facilitator superfamily, general substrate transporter
IPR000109 Oligopeptide transporter
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found