Gene Overview  


General information


Gene id
AT3G45630
Species
Arabidopsis thaliana
Transcript
AT3G45630.1
Coordinates
16748751 - 16753190
Strand
negative
Chromosome
3
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM002216   57 genes in 22 species
Sub family
ORTHO000949   44 genes in 22 species
Duplication type
Block duplicate
Description
RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink).;RNA binding (RRM/RBD/RNP motifs) family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR001841 Zinc finger, RING-type
IPR012677 Nucleotide-binding, alpha-beta plait
IPR000504 RNA recognition motif, RNP-1
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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