Gene Overview 
General information
- Gene id
- AT3G28956
- Species
- Arabidopsis thaliana
- Transcript
- AT3G28956.1
- Coordinates
- 10980789 - 10981380
- Strand
- negative
- Chromosome
- 3
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM002894 45 genes in 17 species
- Description
- RNA polymerase II, Rpb4, core protein; FUNCTIONS IN: DNA-directed RNA polymerase activity, nucleotide binding, catalytic activity; INVOLVED IN: cellular metabolic process, transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HRDC-like (InterPro:IPR010997), RNA polymerase II, Rpb4 (InterPro:IPR005574), RNA polymerase II, Rpb4, core (InterPro:IPR006590); BEST Arabidopsis thaliana protein match is: RNA polymerase II, Rpb4, core protein (TAIR:AT5G62950.3); Has 159 Blast hits to 159 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 17; Plants - 37; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).;RNA polymerase II, Rpb4, core protein
- Comment
- transcripteqProtein information
- Gene structure
-
Loading...please wait
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
Loading....please wait
- InterPro domain(s)
-
Interpro id Description IPR006590 RNA polymerase II, Rpb4, core IPR005574 RNA polymerase II, Rpb4 IPR010997 HRDC-like