Gene Overview 
General information
- Gene id
- AT3G28290
- Species
- Arabidopsis thaliana
- Transcript
- AT3G28290.1
- Coordinates
- 10547873 - 10549030
- Strand
- positive
- Chromosome
- 3
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM001424 82 genes in 19 species
- Sub family
- ORTHO046758 2 genes in 1 species
- Duplication type
- Tandem duplicate
- Description
- Encodes a protein with sequence similarity to integrins. Localized to the cytoplasm and plasma membrane. Expressed in all tissues assayed.;Protein of unknown function (DUF677)
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0008305 integrin complex C_Hunter 1 3 6 0.00000594933 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR007749 Protein of unknown function DUF677