Gene Overview  


General information


Gene id
AT3G26650
Species
Arabidopsis thaliana
Transcript
AT3G26650.1
Coordinates
9795226 - 9796848
Strand
positive
Chromosome
3
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000390   235 genes in 25 species
Sub family
ORTHO002616   31 genes in 18 species
Duplication type
Block duplicate
Description
Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).;glyceraldehyde 3-phosphate dehydrogenase A subunit
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0009409response to coldC_Hunter3202570.000247174
GO:0044434chloroplast partC_Hunter3322950.000833691
InterPro domain(s)
Interpro idDescription
IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site
IPR016040 NAD(P)-binding domain
IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I
IPR020831 Glyceraldehyde 3-phosphate dehydrogenase family
IPR020832 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup
IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
IPR000173 Glyceraldehyde 3-phosphate dehydrogenase subfamily
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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