Gene Overview  


General information


Gene id
AT3G19620
Species
Arabidopsis thaliana
Transcript
AT3G19620.1
Coordinates
6815613 - 6818308
Strand
negative
Chromosome
3
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000326   267 genes in 20 species
Sub family
ORTHO000032   195 genes in 20 species
Description
Glycosyl hydrolase family protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-D-xylosidase 4 (TAIR:AT5G64570.1); Has 9087 Blast hits to 7801 proteins in 1160 species: Archae - 63; Bacteria - 5399; Metazoa - 17; Fungi - 1628; Plants - 528; Viruses - 0; Other Eukaryotes - 1452 (source: NCBI BLink).;Glycosyl hydrolase family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR002772 Glycoside hydrolase, family 3, C-terminal
IPR001764 Glycoside hydrolase, family 3, N-terminal
IPR017853 Glycoside hydrolase, catalytic core
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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