Gene Overview  


General information


Gene id
AT3G16180
Species
Arabidopsis thaliana
Transcript
AT3G16180.1
Coordinates
5481477 - 5484943
Strand
negative
Chromosome
3
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000031   1620 genes in 22 species
Sub family
ORTHO002953   30 genes in 16 species
Duplication type
Block duplicate
Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G52190.1); Has 5584 Blast hits to 5329 proteins in 963 species: Archae - 0; Bacteria - 2098; Metazoa - 610; Fungi - 414; Plants - 2170; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink).;Major facilitator superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR000109 Oligopeptide transporter
IPR016196 Major facilitator superfamily, general substrate transporter
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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