Gene Overview 
General information
- Gene id
- AT3G15070
- Species
- Arabidopsis thaliana
- Transcript
- AT3G15070.1
- Coordinates
- 5070472 - 5072344
- Strand
- negative
- Chromosome
- 3
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000196 377 genes in 25 species
- Sub family
- ORTHO009913 19 genes in 12 species
- Duplication type
- Block duplicate
- Description
- RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G53190.2); Has 7358 Blast hits to 7345 proteins in 274 species: Archae - 0; Bacteria - 4; Metazoa - 2154; Fungi - 590; Plants - 3295; Viruses - 49; Other Eukaryotes - 1266 (source: NCBI BLink).;RING/U-box superfamily protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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- ...the colinearity of this gene with other genomes.
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View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR018957 Zinc finger, C3HC4 RING-type IPR001841 Zinc finger, RING-type