Gene Overview 
General information
- Gene id
- AT3G06720
- Species
- Arabidopsis thaliana
- Transcript
- AT3G06720.1
- Coordinates
- 2120559 - 2123555
- Strand
- positive
- Chromosome
- 3
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000602 167 genes in 25 species
- Sub family
- ORTHO000169 88 genes in 25 species
- Duplication type
- Block duplicate
- Description
- Encodes importin alpha involved in nuclear import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.;importin alpha isoform 1
- Comment
- transcripteqProtein information
- Gene structure
-
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
-
Interpro id Description IPR000225 Armadillo IPR002652 Importin-alpha-like, importin-beta-binding domain IPR016024 Armadillo-type fold IPR011989 Armadillo-like helical