Gene Overview  


General information


Gene id
AT2G45880
Species
Arabidopsis thaliana
Transcript
AT2G45880.1
Coordinates
18878674 - 18881824
Strand
negative
Chromosome
2
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000363   248 genes in 25 species
Sub family
ORTHO001368   39 genes in 19 species
Duplication type
Block duplicate
Description
beta-amylase 7 (BAM7); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 2 (TAIR:AT4G00490.1); Has 965 Blast hits to 963 proteins in 157 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 3; Plants - 810; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).;beta-amylase 7
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR001554 Glycoside hydrolase, family 14
IPR008540 BZR1, transcriptional repressor
IPR017853 Glycoside hydrolase, catalytic core
IPR013781 Glycoside hydrolase, subgroup, catalytic core
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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