Gene Overview 
General information
- Gene id
- AT2G43120
- Species
- Arabidopsis thaliana
- Transcript
- AT2G43120.1
- Coordinates
- 17927339 - 17928871
- Strand
- positive
- Chromosome
- 2
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM001456 81 genes in 24 species
- Sub family
- ORTHO005793 25 genes in 21 species
- Duplication type
- Block duplicate
- Description
- RmlC-like cupins superfamily protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem, flower; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: pirin (TAIR:AT3G59220.1); Has 7357 Blast hits to 7357 proteins in 1454 species: Archae - 66; Bacteria - 4603; Metazoa - 71; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink).;RmlC-like cupins superfamily protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
-
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- ...the colinearity of this gene with other genomes.
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View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR011051 Cupin, RmlC-type IPR012093 Pirin IPR008778 Pirin, C-terminal IPR003829 Pirin, N-terminal