Gene Overview  


General information


Gene id
AT2G42170
Species
Arabidopsis thaliana
Transcript
AT2G42170.1
Coordinates
17578683 - 17580222
Strand
positive
Chromosome
2
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000179   414 genes in 25 species
Duplication type
Tandem duplicate
Description
Actin family protein; FUNCTIONS IN: structural constituent of cytoskeleton, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: actin cytoskeleton; EXPRESSED IN: vascular bundle; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1); Has 13233 Blast hits to 12851 proteins in 2620 species: Archae - 6; Bacteria - 13; Metazoa - 5650; Fungi - 3392; Plants - 1602; Viruses - 2; Other Eukaryotes - 2568 (source: NCBI BLink).;Actin family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

Loading...please wait

Functional annotation information


GO term(s)
Loading....please wait
Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0015629actin cytoskeletonC_Hunter1390.000249498
InterPro domain(s)
Interpro idDescription
IPR004001 Actin, conserved site
IPR004000 Actin/actin-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found