Gene Overview  


General information


Gene id
AT2G42100
Species
Arabidopsis thaliana
Transcript
AT2G42100.1
Coordinates
17560211 - 17561945
Strand
positive
Chromosome
2
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000179   414 genes in 25 species
Sub family
ORTHO000050   159 genes in 24 species
Duplication type
Tandem duplicate
Description
Actin-like ATPase superfamily protein; FUNCTIONS IN: structural constituent of cytoskeleton, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: actin cytoskeleton; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 15158 Blast hits to 14731 proteins in 3038 species: Archae - 6; Bacteria - 6; Metazoa - 5717; Fungi - 5232; Plants - 1603; Viruses - 2; Other Eukaryotes - 2592 (source: NCBI BLink).;Actin-like ATPase superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0015629actin cytoskeletonC_Hunter1390.000249498
InterPro domain(s)
Interpro idDescription
IPR004001 Actin, conserved site
IPR004000 Actin/actin-like
IPR020902 Actin/actin-like conserved site
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found