Gene Overview 
General information
- Gene id
- AT2G40220
- Species
- Arabidopsis thaliana
- Transcript
- AT2G40220.1
- Coordinates
- 16796599 - 16797585
- Strand
- negative
- Chromosome
- 2
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000010 2542 genes in 25 species
- Sub family
- ORTHO008637 21 genes in 17 species
- Duplication type
- Tandem duplicate
- Description
- Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.;Integrase-type DNA-binding superfamily protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
-
Loading...please wait
previous gene
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
Loading....please wait
- InterPro domain(s)
-
View InterPro domain(s) mappingInterpro id Description IPR001471 Pathogenesis-related transcriptional factor/ERF, DNA-binding IPR016177 DNA-binding, integrase-type