Gene Overview  


General information


Gene id
AT2G38100
Species
Arabidopsis thaliana
Transcript
AT2G38100.1
Coordinates
15948484 - 15950228
Strand
negative
Chromosome
2
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000031   1620 genes in 22 species
Sub family
ORTHO025886   4 genes in 4 species
Duplication type
Tandem duplicate   and   Block duplicate
Description
proton-dependent oligopeptide transport (POT) family protein; FUNCTIONS IN: amino acid transmembrane transporter activity, uracil transmembrane transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 2766 Blast hits to 2715 proteins in 326 species: Archae - 0; Bacteria - 547; Metazoa - 329; Fungi - 2; Plants - 1871; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).;proton-dependent oligopeptide transport (POT) family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0006810transportC_Hunter119770.000903183
GO:0006810transportC_Hunter319770.000903183
InterPro domain(s)
Interpro idDescription
IPR000109 Oligopeptide transporter
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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