Gene Overview 
General information
- Gene id
- AT2G32950
- Species
- Arabidopsis thaliana
- Transcript
- AT2G32950.1
- Coordinates
- 13978000 - 13983282
- Strand
- positive
- Chromosome
- 2
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000668 157 genes in 25 species
- Sub family
- ORTHO001174 41 genes in 22 species
- Description
- Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.;Transducin/WD40 repeat-like superfamily protein
- Comment
- transcripteqProtein information
- Gene structure
-
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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Interpro id Description IPR017986 WD40-repeat-containing domain IPR001841 Zinc finger, RING-type IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR018957 Zinc finger, C3HC4 RING-type IPR019782 WD40 repeat 2 IPR019775 WD40 repeat, conserved site IPR017907 Zinc finger, RING-type, conserved site IPR019781 WD40 repeat, subgroup