Gene Overview  


General information


Gene id
AT2G32290
Species
Arabidopsis thaliana
Transcript
AT2G32290.1
Coordinates
13714643 - 13716906
Strand
negative
Chromosome
2
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000363   248 genes in 25 species
Sub family
ORTHO003454   29 genes in 17 species
Duplication type
Block duplicate
Description
beta-amylase 6 (BAM6); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-amylase 5 (TAIR:AT4G15210.1); Has 842 Blast hits to 841 proteins in 166 species: Archae - 0; Bacteria - 87; Metazoa - 0; Fungi - 0; Plants - 690; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).;beta-amylase 6
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

Loading...please wait

Functional annotation information


GO term(s)
Loading....please wait
InterPro domain(s)
Interpro idDescription
IPR018238 Glycoside hydrolase, family 14, conserved site
IPR001554 Glycoside hydrolase, family 14
IPR001371 Glycoside hydrolase, family 14B, plant
IPR013781 Glycoside hydrolase, subgroup, catalytic core
IPR017853 Glycoside hydrolase, catalytic core
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found