Gene Overview 
General information
- Gene id
- AT2G31020
- Species
- Arabidopsis thaliana
- Transcript
- AT2G31020.1
- Coordinates
- 13201668 - 13204682
- Strand
- positive
- Chromosome
- 2
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000499 196 genes in 25 species
- Sub family
- ORTHO000173 87 genes in 20 species
- Duplication type
- Tandem duplicate
- Description
- OSBP(oxysterol binding protein)-related protein 1A (ORP1A); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1C (TAIR:AT4G08180.1); Has 2870 Blast hits to 2614 proteins in 228 species: Archae - 2; Bacteria - 10; Metazoa - 1527; Fungi - 710; Plants - 301; Viruses - 8; Other Eukaryotes - 312 (source: NCBI BLink).;OSBP(oxysterol binding protein)-related protein 1A
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
-
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
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- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
-
View InterPro domain(s) mappingInterpro id Description IPR001849 Pleckstrin homology IPR000648 Oxysterol-binding protein IPR011993 Pleckstrin homology-type