Gene Overview  


General information


Gene id
AT2G27880
Species
Arabidopsis thaliana
Transcript
AT2G27880.1
Coordinates
11871488 - 11876712
Strand
positive
Chromosome
2
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000200   367 genes in 23 species
Sub family
ORTHO000073   136 genes in 23 species
Description
ARGONAUTE 5 (AGO5); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Argonaute/Dicer protein, PAZ (InterPro:IPR003100); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1); Has 2539 Blast hits to 2399 proteins in 280 species: Archae - 0; Bacteria - 80; Metazoa - 1295; Fungi - 341; Plants - 581; Viruses - 6; Other Eukaryotes - 236 (source: NCBI BLink).;Argonaute family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR003100 Argonaute/Dicer protein, PAZ
IPR003165 Stem cell self-renewal protein Piwi
IPR014811 Domain of unknown function DUF1785
IPR012337 Polynucleotidyl transferase, ribonuclease H fold
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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