Gene Overview  


General information


Gene id
AT2G27040
Species
Arabidopsis thaliana
Transcript
AT2G27040.1
Coordinates
11536795 - 11541503
Strand
negative
Chromosome
2
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000200   367 genes in 23 species
Sub family
ORTHO000306   70 genes in 20 species
Description
AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.;Argonaute family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter230370.000883308
GO:0044464cell partC_Hunter456770.00000466314
InterPro domain(s)
Interpro idDescription
IPR012337 Polynucleotidyl transferase, ribonuclease H fold
IPR003100 Argonaute/Dicer protein, PAZ
IPR014811 Domain of unknown function DUF1785
IPR003165 Stem cell self-renewal protein Piwi
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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