Gene Overview 
General information
- Gene id
- AT2G25190
- Species
- Arabidopsis thaliana
- Transcript
- AT2G25190.1
- Coordinates
- 10734187 - 10735426
- Strand
- positive
- Chromosome
- 2
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000533 187 genes in 25 species
- Sub family
- ORTHO021175 5 genes in 5 species
- Duplication type
- Block duplicate
- Description
- PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31980.1); Has 848 Blast hits to 846 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 230; Fungi - 77; Plants - 355; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).;PPPDE putative thiol peptidase family protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
-
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
-
View InterPro domain(s) mappingInterpro id Description IPR008580 Protein of unknown function DUF862, eukaryotic