Gene Overview  


General information


Gene id
AT2G24640
Species
Arabidopsis thaliana
Transcript
AT2G24640.1
Coordinates
10475613 - 10479341
Strand
negative
Chromosome
2
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000231   336 genes in 25 species
Sub family
ORTHO003048   30 genes in 21 species
Duplication type
Block duplicate
Description
ubiquitin-specific protease 19 (UBP19); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1); Has 10197 Blast hits to 8718 proteins in 376 species: Archae - 10; Bacteria - 271; Metazoa - 4969; Fungi - 1754; Plants - 1124; Viruses - 12; Other Eukaryotes - 2057 (source: NCBI BLink).;ubiquitin-specific protease 19
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

Loading...please wait

Functional annotation information


GO term(s)
Loading....please wait
InterPro domain(s)
Interpro idDescription
IPR002893 Zinc finger, MYND-type
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found