Gene Overview 
General information
- Gene id
- AT2G23930
- Species
- Arabidopsis thaliana
- Transcript
- AT2G23930.1
- Coordinates
- 10182353 - 10183026
- Strand
- positive
- Chromosome
- 2
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM003946 34 genes in 22 species
- Sub family
- ORTHO002698 31 genes in 22 species
- Description
- probable small nuclear ribonucleoprotein G (SNRNP-G); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G11500.1); Has 1247 Blast hits to 1247 proteins in 267 species: Archae - 124; Bacteria - 0; Metazoa - 472; Fungi - 280; Plants - 197; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).;probable small nuclear ribonucleoprotein G
- Comment
- transcripteqProtein information
- Gene structure
-
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
-
Interpro id Description IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain IPR001163 Like-Sm ribonucleoprotein (LSM) domain