Gene Overview  


General information


Gene id
AT2G18790
Species
Arabidopsis thaliana
Transcript
AT2G18790.1
Coordinates
8140079 - 8144151
Strand
positive
Chromosome
2
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000655   159 genes in 25 species
Sub family
ORTHO000206   82 genes in 19 species
Description
Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response.;phytochrome B
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR001294 Phytochrome
IPR000014 PAS
IPR013654 PAS fold-2
IPR013767 PAS fold
IPR003594 ATPase-like, ATP-binding domain
IPR013516 Phytochrome chromophore binding site
IPR013515 Phytochrome, central region
IPR003661 Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
IPR005467 Signal transduction histidine kinase, core
IPR016132 Phytochrome chromophore attachment domain
IPR003018 GAF
IPR012129 Phytochrome A/B/C/D/E
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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