Gene Overview 
General information
- Gene id
- AT1G79520
- Species
- Arabidopsis thaliana
- Transcript
- AT1G79520.2
- Coordinates
- 29912369 - 29914515
- Strand
- negative
- Chromosome
- 1
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000789 138 genes in 25 species
- Sub family
- ORTHO004233 27 genes in 18 species
- Duplication type
- Block duplicate
- Description
- Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G16310.1).;Cation efflux family protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
-
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
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- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- Functional clusters
-
GO term Description Type Experiment Cluster size Number of genes E-value GO:0044464 cell part C_Hunter 4 90 143 0.00000768246 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR002524 Cation efflux protein