Gene Overview  


General information


Gene id
AT1G79050
Species
Arabidopsis thaliana
Transcript
AT1G79050.1
Coordinates
29737084 - 29740140
Strand
negative
Chromosome
1
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000395   234 genes in 25 species
Sub family
ORTHO008241   22 genes in 21 species
Description
recA DNA recombination family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination/repair protein RecA, conserved site (InterPro:IPR020584), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;recA DNA recombination family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR003593 ATPase, AAA+ type, core
IPR013765 DNA recombination and repair protein RecA
IPR020588 DNA recombination/repair protein RecA/RadB, ATP-binding domain
IPR020587 DNA recombination/repair protein RecA, monomer-monomer interface
IPR014774 Circadian clock protein KaiC/DNA repair protein RadA
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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