Gene Overview  


General information


Gene id
AT1G59970
Species
Arabidopsis thaliana
Transcript
AT1G59970.1
Coordinates
22073601 - 22074683
Strand
positive
Chromosome
1
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000471   206 genes in 20 species
Sub family
ORTHO042541   2 genes in 2 species
Duplication type
Block duplicate
Description
Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: Matrixin family protein (TAIR:AT1G24140.1); Has 2665 Blast hits to 2469 proteins in 210 species: Archae - 2; Bacteria - 119; Metazoa - 2216; Fungi - 6; Plants - 186; Viruses - 42; Other Eukaryotes - 94 (source: NCBI BLink).;Matrixin family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR002477 Peptidoglycan binding-like
IPR001818 Peptidase M10, metallopeptidase
IPR006026 Peptidase, metallopeptidase
IPR021190 Peptidase M10A, matrix metallopeptidase, conserved region
IPR021158 Peptidase M10A, cysteine switch, zinc binding site
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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