Gene Overview  


General information


Gene id
AT1G48670
Species
Arabidopsis thaliana
Transcript
AT1G48670.1
Coordinates
17998946 - 18001200
Strand
negative
Chromosome
1
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000291   288 genes in 20 species
Sub family
ORTHO000053   155 genes in 20 species
Duplication type
Tandem duplicate
Description
auxin-responsive GH3 family protein; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT1G48660.1); Has 1327 Blast hits to 1306 proteins in 228 species: Archae - 0; Bacteria - 396; Metazoa - 53; Fungi - 2; Plants - 668; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink).;auxin-responsive GH3 family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0009816defense response to bacterium, incompatible interactionC_Hunter1220.000595203
InterPro domain(s)
Interpro idDescription
IPR004993 GH3 auxin-responsive promoter
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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