Gene Overview  


General information


Gene id
AT1G47730
Species
Arabidopsis thaliana
Transcript
AT1G47730.1
Coordinates
17563931 - 17565106
Strand
negative
Chromosome
1
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000233   335 genes in 5 species
Sub family
ORTHO042209   2 genes in 2 species
Duplication type
Tandem duplicate
Description
F-box and associated interaction domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G48060.1); Has 1939 Blast hits to 1873 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1937; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;F-box and associated interaction domains-containing protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0009414response to water deprivationC_Hunter3151280.00000163287
InterPro domain(s)
Interpro idDescription
IPR013187 F-box associated domain, type 3
IPR017451 F-box associated interaction domain
IPR001810 Cyclin-like F-box
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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