Gene Overview 
General information
- Gene id
- AT1G25560
- Species
- Arabidopsis thaliana
- Transcript
- AT1G25560.1
- Coordinates
- 8981891 - 8982976
- Strand
- negative
- Chromosome
- 1
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000447 216 genes in 20 species
- Sub family
- ORTHO002929 30 genes in 19 species
- Duplication type
- Block duplicate
- Description
- Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.;AP2/B3 transcription factor family protein
- Comment
- transcripteqProtein information
- Gene structure
-
Loading...please wait
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
Loading....please wait
- Functional clusters
-
GO term Description Type Experiment Cluster size Number of genes E-value GO:0010468 regulation of gene expression C_Hunter 3 40 199 0.00000158296 - InterPro domain(s)
-
Interpro id Description IPR003340 Transcriptional factor B3 IPR001471 Pathogenesis-related transcriptional factor/ERF, DNA-binding IPR016177 DNA-binding, integrase-type