Gene Overview 
General information
- Gene id
- AT1G24140
- Species
- Arabidopsis thaliana
- Transcript
- AT1G24140.1
- Coordinates
- 8536131 - 8537285
- Strand
- negative
- Chromosome
- 1
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000471 206 genes in 20 species
- Sub family
- ORTHO001948 34 genes in 20 species
- Duplication type
- Block duplicate
- Description
- Matrixin family protein; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: matrix metalloproteinase (TAIR:AT1G70170.1); Has 2621 Blast hits to 2428 proteins in 195 species: Archae - 3; Bacteria - 89; Metazoa - 2200; Fungi - 4; Plants - 185; Viruses - 42; Other Eukaryotes - 98 (source: NCBI BLink).;Matrixin family protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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View
- ....the multiple sequence alignment of the homologous gene family.
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- ...BLAST hits against NCBI's protein database.
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Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR002477 Peptidoglycan binding-like IPR001818 Peptidase M10, metallopeptidase IPR006026 Peptidase, metallopeptidase IPR021190 Peptidase M10A, matrix metallopeptidase, conserved region IPR021158 Peptidase M10A, cysteine switch, zinc binding site