Gene Overview 
General information
- Gene id
- AT1G12040
- Species
- Arabidopsis thaliana
- Transcript
- AT1G12040.1
- Coordinates
- 4070160 - 4072394
- Strand
- positive
- Chromosome
- 1
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000308 276 genes in 20 species
- Sub family
- ORTHO018758 6 genes in 6 species
- Duplication type
- Block duplicate
- Description
- encodes a a chimeric leucine-rich repeat/extensin protein that regulates root hair morphogenesis and elongation. Null mutants develop root hairs that frequently abort, swell, or branch. Gene is expressed in root hair cells and protein is specifically localized in the wall of the hair proper.;leucine-rich repeat/extensin 1
- Comment
- transcripteqProtein information
- Gene structure
-
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
-
Interpro id Description IPR001611 Leucine-rich repeat IPR013210 Leucine-rich repeat-containing N-terminal domain, type 2