Gene Overview 
General information
- Gene id
- AL5G24500
- Species
- Arabidopsis lyrata
- Transcript
- AL5G24500.1
- Coordinates
- 17013984 - 17022352
- Strand
- negative
- Chromosome
- scaffold_5
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM004550 31 genes in 23 species
- Comment
- namefgenesh2_kg.5__1836__AT3G54440.1Protein id485844Transcript id485844Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR017853 Glycoside hydrolase, catalytic core IPR011013 Glycoside hydrolase-type carbohydrate-binding IPR008979 Galactose-binding domain-like IPR006102 Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich IPR006103 Glycoside hydrolase family 2, TIM barrel IPR004199 Glycoside hydrolase, family 42, domain 5 IPR006104 Glycoside hydrolase family 2, carbohydrate-binding IPR006101 Glycoside hydrolase, family 2 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup